Saving
This module gives a single function for saving the results of an MCMC run. Everything gets saved in a .hdf5
file using h5py.
- saving.save_mcmc(mcmc, params, outpath, filename='outputs', **kwargs)
Saves the MCMC run in a
.hd5f
file. Any variable defined by amcmc.PxMCMC
instance’stracking
option will be saved as a dataset. Runtime parameters and other things that the user may wish to save are saved as attributes.- Parameters
mcmc – type
mcmc.PxMCMC
after itsrun()
has been called.params – type
mcmc.PxMCMCParams
used to setup themcmc
instance.outpath (string) – directory in which file should be saved.
filename (string) – filename without extension.
**kwargs – additional bits users want to save.